For those who need to do analyses of DNA-seq (including de novo assembly), RNA-seq, ChIP seq (these are just examples), and who would be interested in a software to help you in these kinds of analyses (with intuitive tools, guides and tutorials), there will be a presentation of CLC Genomics Workbench from QIAGEN. The presentation of this software will be given by Elodie Dubus, a Qiagen software specialist, and for those who have already started to work with this software and want to go deeper in the comprehension of this tool and their databases there will be a workshop dedicated to what you want to do.
Specific analyses, the workshop session will be from 9:00 to 10:30, at Genopolys, room « Open ».
Introduction of the CLC Genomics Workbench tools will take place from 10:30 to 12:15, at Genopolys, room « Open » (2nd floor).
If you want to have more information about these softwares and their other solutions (CLC GxW / IPA / QCII) and their databases (HGMD/HSMD), here are some links :
- CLC Genomic Workbench
- ChIP Seq analysis:
- Tool « Pattern Discovery » : http://resources.qiagenbioinformatics.com/manuals/clcgenomicsworkbench/current/index.php?manual=Pattern_discovery.html
- Motif search :
- Ingenuity Pathway Analysis (IPA)
- Qiagen Clinical Insight (QCI)
- Human Gene Mutation Database (HGMD)
- Human Somatic Mutation Database (HSMD)
